Publications – SMCRI

Recent Publications

2022

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Cunningham, E. M., Rico Seijo, N., Altieri, K. E., Audh, R. R., Burger, J. M., Bornman, T. G., Fawcett, S., Gwinnett, C. M. B., Osborne, A. O., & Woodall, L. C. (2022). The transport and fate of microplastic fibres in the Antarctic: The role of multiple global processes. Frontiers in Marine Science, 9. https://www.frontiersin.org/articles/10.3389/fmars.2022.1056081 Cite

Dąbek, P., Gastineau, R., Bornman, T. G., Lemieux, C., Turmel, M., Hallegraeff, G., Mouget, J.-L., & Witkowski, A. (2022). The blue diatom Haslea ostrearia from the Indian Ocean coast of South Africa, with comparative analysis of Haslea organellar genomes. Frontiers in Marine Science, 9. https://doi.org/doi: 10.3389/fmars.2022.950716 Cite

Edworthy, C., Potts, W., Dupont, S., Duncan, M., Bornman, T., & James, N. (2022). A baseline assessment of coastal pH variability in a temperate South African embayment: implications for biological ocean acidification research. African Journal of Marine Science, 44(4), 367–381. https://doi.org/10.2989/1814232X.2022.2147999 Cite

Holman, L. E., Parker-Nance, S., de Bruyn, M., Creer, S., Carvalho, G., & Rius, M. (2022). Managing human-mediated range shifts: understanding spatial, temporal and genetic variation in marine non-native species. Philosophical Transactions of the Royal Society B: Biological Sciences, 377(1846), 20210025. https://doi.org/10.1098/rstb.2021.0025 Cite

Holness, S. D., Harris, L. R., Chalmers, R., De Vos, D., Goodall, V., Truter, H., Oosthuizen, A., Bernard, A. T. F., Cowley, P. D., da Silva, C., Dicken, M., Edwards, L., Marchand, G., Martin, P., Murray, T. S., Parkinson, M. C., Pattrick, P., Pichegru, L., Pistorius, P., … Lombard, A. T. (2022). Using systematic conservation planning to align priority areas for biodiversity and nature-based activities in marine spatial planning: A real-world application in contested marine space. Biological Conservation, 271, 109574. https://doi.org/10.1016/j.biocon.2022.109574 Cite

Huggett, J. A., Groeneveld, J. C., Singh, S. P., Willows-Munro, S., Govender, A., Cedras, R., & Deyzel, S. H. P. (2022). Metabarcoding of zooplankton to derive indicators of pelagic ecosystem status. South African Journal of Science, 118(11/12). https://doi.org/10.17159/sajs.2022/12977 Cite

Human, L. R. D., Els, J., Wasserman, J., & Adams, J. B. (2022). Blue carbon and nutrient stocks in salt marsh and seagrass from an urban African estuary. Science of The Total Environment, 842, 156955. https://doi.org/10.1016/j.scitotenv.2022.156955 Cite

Lemley, D. A., Human, L. R. D., Rishworth, G. M., Whitfield, E., & Adams, J. B. (2022). Managing the Seemingly Unmanageable: Water Quality and Phytoplankton Dynamics in a Heavily Urbanised Low-Inflow Estuary. Estuaries and Coasts. https://doi.org/10.1007/s12237-022-01128-z Cite

Mfikili, A. N., Bornman, T. G., & du Preez, D. R. (2022). Sediment deposition and its implications for vertical accretion in an intertidal salt marsh—A case study of a microtidal estuary along the southeast coast of South Africa. Regional Studies in Marine Science, 51, 102203. https://doi.org/10.1016/j.rsma.2022.102203 Cite

Nel, M. A., Rubidge, G., Adams, J. B., & Human, L. R. D. (2022). Contributions of Wetland Plants on Metal Accumulation in Sediment. Sustainability, 14(6), 3679. https://doi.org/10.3390/su14063679 Cite

Olisah, C., Rubidge, G., Human, L. R. D., & Adams, J. B. (2022). Organophosphate pesticides in South African eutrophic estuaries: Spatial distribution, seasonal variation, and ecological risk assessment. Environmental Pollution, 306, 119446. https://doi.org/10.1016/j.envpol.2022.119446 Cite

Puccinelli, E., Porri, F., Altieri, K., Flynn, R., Little, H., Louw, T., Pattrick, P., Sparks, C., Tsanwani, M., de Waardt, S., Walker, D., & Fawcett, S. (2022). Coastal ecosystem services in South Africa’s largest natural bay: The role of marine benthic filter feeders in mitigating pollution. Ecological Indicators, 139, 108899. https://doi.org/10.1016/j.ecolind.2022.108899 Cite

Swartbooi, T. B., Rubidge, G., Gibbs, M. D., & Ferg, E. E. (2022). Effect of a Hands-On Chemistry Intervention on the behavioural and effective attitudes of learners from low socio-economic high schools. South African Journal of Chemistry, 76(1), 102–110. https://doi.org/10.17159/0379-4350/2022/v76a15 Cite

2021

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Cotiyane-Pondo, P., & Bornman, T. G. (2021). Environmental Heterogeneity Determines Diatom Colonisation on Artificial Substrata: Implications for Biomonitoring in Coastal Marine Waters. Frontiers in Ecology and Evolution, 9. https://www.frontiersin.org/articles/10.3389/fevo.2021.767960 Cite

Flynn, R. F., Bornman, T. G., Burger, J. M., Smith, S., Spence, K. A. M., & Fawcett, S. E. (2021). Summertime productivity and carbon export potential in the Weddell Sea, with a focus on the waters adjacent to Larsen C Ice Shelf. Biogeosciences, 18(22), 6031–6059. https://doi.org/10.5194/bg-18-6031-2021 Cite

Fonge, B. A., Tabot, P. T., Charleine, D. S., Mambo, F. Q., & Human, L. (2021). Ecophysiological and Anthropogenic Determinants of Phytoplankton Community Structure in Streams Receiving Effluents from the Douala-Bassa Industrial Zone. Asian Journal of Environment & Ecology, 24–38. https://doi.org/10.9734/ajee/2021/v14i130195 Cite

Juby, R., Bernard, A., & Götz, A. (2021). Day/night patterns of habitat use by dogfish sharks (Squalidae) at photic and subphotic warm-temperate reefs: evidence for diel movements and size- and sex-segregation. African Journal of Marine Science, 43(3), 325–336. https://doi.org/10.2989/1814232X.2021.1951839 Cite

Kalinski, J.-C. J., Krause, R. W. M., Parker-Nance, S., Waterworth, S. C., & Dorrington, R. A. (2021). Unlocking the Diversity of Pyrroloiminoquinones Produced by Latrunculid Sponge Species. Marine Drugs, 19(2), 68. https://doi.org/10.3390/md19020068 Cite

McCarroll, R. J., Scott, T., King, E. V., Masselink, G., Ciotti, B. J., Cloete, A., Steyn, P.-P., Britz, P., Vine, N. G., Deyzel, S. H. P., Witte, A., & Clark, R. (2021). Modelling regional and local-scale larval seeding strategies for abalone (H. midae) ranching in South Africa. Aquaculture, 540, 736668. https://doi.org/10.1016/j.aquaculture.2021.736668 Cite

Olisah, C., Rubidge, G., Human, L. R. D., & Adams, J. B. (2021). A translocation analysis of organophosphate pesticides between surface water, sediments and tissues of common reed Phragmites australis. Chemosphere, 284, 131380. https://doi.org/10.1016/j.chemosphere.2021.131380 Cite

Olisah, C., Human, L. R. D., Rubidge, G., & Adams, J. B. (2021). Organophosphate pesticides sequestered in tissues of a seagrass species – Zostera capensis from a polluted watershed. Journal of Environmental Management, 300, 113657. https://doi.org/10.1016/j.jenvman.2021.113657 Cite

Passuni, G., Human, L., Riddick, S., Pattrick, P., Bizani, M., Deyzel, S., Strydom, N., Bornman, T., & Pichegru, L. (2021). Is the largest African penguin colony in South Africa influencing local ocean productivity? African Journal of Marine Science, 43(4), 455–469. https://doi.org/10.2989/1814232X.2021.1987984 Cite

Pattrick, P., Weidberg, N., Goschen, W. S., Jackson, J. M., McQuaid, C. D., & Porri, F. (2021). Larval Fish Assemblage Structure at Coastal Fronts and the Influence of Environmental Variability. Frontiers in Ecology and Evolution, 9. https://www.frontiersin.org/articles/10.3389/fevo.2021.684502 Cite

Porri, F., Puccinelli, E., Weidberg, N., & Pattrick, P. (2021). Lack of match between nutrient-enriched marine seafoam and intertidal abundance of long-lived invertebrate larvae. Journal of Sea Research, 170, 102009. https://doi.org/10.1016/j.seares.2021.102009 Cite

Stirnimann, L., Bornman, T. G., Verheye, H. M., Bachèlery, M.-L., van der Poel, J., & Fawcett, S. E. (2021). Plankton community composition and productivity near the Subantarctic Prince Edward Islands archipelago in autumn. Limnology and Oceanography, 66(12), 4140–4158. https://doi.org/10.1002/lno.11949 Cite

Vorsatz, L. D., Pattrick, P., & Porri, F. (2021). Fine-scale conditions across mangrove microhabitats and larval ontogeny contributes to the thermal physiology of early stage brachyurans (Crustacea: Decapoda). Conservation Physiology, 9(1), coab010. https://doi.org/10.1093/conphys/coab010 Cite

Vorsatz, L. D., Pattrick, P., & Porri, F. (2021). Ecological scaling in mangroves: The role of microhabitats for the distribution of larval assemblages. Estuarine, Coastal and Shelf Science, 253, 107318. https://doi.org/10.1016/j.ecss.2021.107318 Cite

Waterworth, S. C., Parker-Nance, S., Kwan, J. C., & Dorrington, R. A. (2021). Comparative Genomics Provides Insight into the Function of Broad-Host Range Sponge Symbionts. MBio, 12(5), e01577-21. https://doi.org/10.1128/mBio.01577-21 Cite

2020

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Coppin, R., Rautenbach, C., Ponton, T. J., & Smit, A. J. (2020). Investigating Waves and Temperature as Drivers of Kelp Morphology. Frontiers in Marine Science, 7. https://www.frontiersin.org/articles/10.3389/fmars.2020.00567 Cite

Cotiyane-Pondo, P., Bornman, T. G., Dąbek, P., Witkowski, A., & Smit, A. J. (2020). Austral winter marine epilithic diatoms: Community composition and distribution on intertidal rocky substrate around the coast of South Africa. Estuarine, Coastal and Shelf Science, 242, 106837. https://doi.org/10.1016/j.ecss.2020.106837 Cite

Dalu, T., Magoro, M. L., Naidoo, L. S., Wasserman, R. J., Human, L. RD., Adams, J. B., Perissinotto, R., Deyzel, S. HP., Wooldridge, T., & Whitfield, A. K. (2020). Microphytobenthos diversity and community structure across different micro-estuaries and micro-outlets: Effects of environmental variables on community structure. Environmental Pollution, 260, 114097. https://doi.org/10.1016/j.envpol.2020.114097 Cite

Human, L., Weitz, R., Allanson, B., & Adams, J. (2020). Nutrient fluxes from sediments pose management challenges for the Knysna Estuary, South Africa. African Journal of Aquatic Science, 45(1–2), 1–9. https://doi.org/10.2989/16085914.2019.1671787 Cite

Human, L. R. D., Feijão, E., Cruz de Carvalho, R., Caçador, I., Reis-Santos, P., Fonseca, V., & Duarte, B. (2020). Mediterranean salt marsh sediment metal speciation and bioavailability changes induced by the spreading of non-indigenous Spartina patens. Estuarine, Coastal and Shelf Science, 243, 106921. https://doi.org/10.1016/j.ecss.2020.106921 Cite

Jury, M. R., & Goschen, W. S. (2020). Physical ocean-atmosphere variability over the shelf of South Africa from reanalysis products. Continental Shelf Research, 202, 104135. https://doi.org/10.1016/j.csr.2020.104135 Cite

Mayombo, N. A. S., Majewska, R., & Smit, A. J. (2020). An Assessment of the Influence of Host Species, Age, and Thallus Part on Kelp-Associated Diatoms. Diversity, 12(10), 385. https://doi.org/10.3390/d12100385 Cite

Nel, M. A., Rubidge, G., Adams, J. B., & Human, L. R. D. (2020). Rhizosediments of Salicornia tegetaria Indicate Metal Contamination in the Intertidal Estuary Zone. Frontiers in Environmental Science, 8. https://www.frontiersin.org/articles/10.3389/fenvs.2020.572730 Cite

Raw, J., Riddin, T., Wasserman, J., Lehman, T., Bornman, T., & Adams, J. (2020). Salt marsh elevation and responses to future sea-level rise in the Knysna Estuary, South Africa. African Journal of Aquatic Science, 45(1–2), 49–64. https://doi.org/10.2989/16085914.2019.1662763 Cite

Rishworth, G. M., Dodd, C., Perissinotto, R., Bornman, T. G., Adams, J. B., Anderson, C. R., Cawthra, H. C., Dorrington, R. A., du Toit, H., Edworthy, C., Gibb, R.-L. A., Human, L. R. D., Isemonger, E. W., Lemley, D. A., Miranda, N. A. F., Peer, N., Raw, J. L., Smith, A. M., Steyn, P.-P., … Welman, S. (2020). Modern supratidal microbialites fed by groundwater: functional drivers, value and trajectories. Earth-Science Reviews, 210, 103364. https://doi.org/10.1016/j.earscirev.2020.103364 Cite

Smit, A. J., Fitchett, J. M., Engelbrecht, F. A., Scholes, R. J., Dzhivhuho, G., & Sweijd, N. A. (2020). Winter Is Coming: A Southern Hemisphere Perspective of the Environmental Drivers of SARS-CoV-2 and the Potential Seasonality of COVID-19. International Journal of Environmental Research and Public Health, 17(16), 5634. https://doi.org/10.3390/ijerph17165634 Cite

Suaria, G., Achtypi, A., Perold, V., Lee, J. R., Pierucci, A., Bornman, T. G., Aliani, S., & Ryan, P. G. (2020). Microfibers in oceanic surface waters: A global characterization. Science Advances, 6(23), eaay8493. https://doi.org/10.1126/sciadv.aay8493 Cite

Sweijd, N. A., & Smit, A. J. (2020). Trends in sea surface temperature and chlorophyll-a in the seven African Large Marine Ecosystems. Environmental Development, 36, 100585. https://doi.org/10.1016/j.envdev.2020.100585 Cite

Wasserman, R. J., Whitfield, A. K., Deyzel, S. H. P., James, N. C., & Hugo, S. (2020). Seagrass (Zostera capensis) bed development as a predictor of size structured abundance for a ubiquitous estuary-dependent marine fish species. Estuarine, Coastal and Shelf Science, 238, 106694. https://doi.org/10.1016/j.ecss.2020.106694 Cite

2019

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Lemley, D. A., Adams, J. B., Bornman, T. G., Campbell, E. E., & Deyzel, S. H. P. (2019). Land-derived inorganic nutrient loading to coastal waters and potential implications for nearshore plankton dynamics. Continental Shelf Research, 174, 1–11. https://doi.org/10.1016/j.csr.2019.01.003 Cite

Magoro, M., Dalu, T., Human, L., Perissinotto, R., Deyzel, S., Wooldridge, T., Adams, J., & Whitfield, A. (2019). Characterisation of selected micro-estuaries and micro-outlets in South Africa using microalgal, zooplanktonic and macrozoobenthic assemblages. African Journal of Aquatic Science, 44(4), 313–327. https://doi.org/10.2989/16085914.2019.1677211 Cite

2018

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Dalu, T., Magoro, M. L., Tonkin, J. D., Human, L. R. D., Perissinotto, R., Deyzel, S. H. P., Adams, J. B., & Whitfield, A. K. (2018). Assessing phytoplankton composition and structure within micro-estuaries and micro-outlets: a community analysis approach. Hydrobiologia, 818(1), 177–191. https://doi.org/10.1007/s10750-018-3605-0 Cite

Dorrington, R. A., Lombard, A. T., Bornman, T. G., Adams, J. B., Cawthra, H. C., Deyzel, S. H. P., Goschen, W. S., Liu, K., Mahler-Coetzee, J., Matcher, G. F., McQuaid, C., Parker-Nance, S., Paterson, A., Perissinotto, R., Porri, F., Roberts, M., Snow, B., & Vrancken, P. (2018). Working together for our oceans: A marine spatial plan for Algoa Bay, South Africa. South African Journal of Science, 114(3/4), 6–6. https://doi.org/10.17159/sajs.2018/a0247 Cite

Human, L. R. D., Magoro, M. L., Dalu, T., Perissinotto, R., Whitfield, A. K., Adams, J. B., Deyzel, S. H. P., & Rishworth, G. M. (2018). Natural nutrient enrichment and algal responses in near pristine micro-estuaries and micro-outlets. Science of The Total Environment, 624, 945–954. https://doi.org/10.1016/j.scitotenv.2017.12.184 Cite

Mbandzi, N., Wasserman, R. J., Deyzel, S. H. P., Vine, N. G., & Whitfield, A. K. (2018). River flow, zooplankton and dominant zooplanktivorous fish dynamics in a warm-temperate South African estuary. Journal of Fish Biology, 92(6), 1747–1767. https://doi.org/10.1111/jfb.13617 Cite

2017

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Waterworth, S. C., Jiwaji, M., Kalinski, J.-C. J., Parker-Nance, S., & Dorrington, R. A. (2017). A Place to Call Home: An Analysis of the Bacterial Communities in Two Tethya rubra Samaai and Gibbons 2005 Populations in Algoa Bay, South Africa. Marine Drugs, 15(4), 95. https://doi.org/10.3390/md15040095 Cite

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